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BGE publications in 2015

Published on 4 August 2022
Abeille F, Vinjimore Kesavan S, Dolega ME, Gerbaud S, Allier C , Pouteau P, Icard B, Agache V, Gidrol X and Picollet-D’hahan N
Culture conditions can counterbalance the thermosensitive properties of Poly (N-isopropylacrylamide) during cell harvesting.
Journal of Bioprocessing & Biotechniques, 2015, 5(3): 2017

Akerfelt M, Bayramoglu N, Robinson S, Toriseva M, Schukov HP, Harma V, Virtanen J, Sormunen R, Kaakinen M, Kannala J, Eklund L, Heikkila J and Nees M
Automated tracking of tumor-stroma morphology in microtissues identifies functional targets within the tumor microenvironment for therapeutic intervention.
Oncotarget, 2015, 6(30): 30035-30056

Allier CP, Kesavan SV, Cioni O, Momey F, Bordy T, Herve L, Morel S, Navarro F, Menneteau M, Chalmond B, Freida D, Sulpice E, Gidrol X and Dinten JM
Lensfree video microscopy: High throughput monitoring and cell tracking of 2D cell cultures.
Proceedings of the Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Advanced Microscopy Techniques IV; and Neurophotonics II, Munich, Germany, June 24-25, 2015, vol 9536, Article number UNSP 95360J

Balakirev MY, Mullally JE, Favier A, Assard N, Sulpice E, Lindsey DF, Rulina AV, Gidrol X and Wilkinson KD
Wss1 metalloprotease partners with Cdc48/Doa1 in processing genotoxic SUMO conjugates.
eLife, 2015, 4(September2015): number e06763

Barette C, Soleilhac E, Charavay C, Cochet C and Fauvarque MO
Strength and specificity of the CMBA screening platform for bioactive molecules discovery.
Medecine Sciences (Paris), 2015, 31(4): 423-431

Benzina S, Pitaval A, Lemercier C, Lustremant C, Frouin V, Wu N, Papine A, Soussaline F, Romeo PH and Gidrol X
A kinome-targeted RNAi-based screen links FGF signaling to H2AX phosphorylation in response to radiation.
Cellular and Molecular Life Sciences, 2015, 72(18): 3559-3573

Bhajun R, Guyon L, Pitaval A, Sulpice E, Combe S, Obeid P, Haguet V, Ghorbel I, Lajaunie C and Gidrol X
A statistically inferred microRNA network identifies breast cancer target miR-940 as an actin cytoskeleton regulator.
Scientific Reports, 2015, 5: article number: 8336

Brodin P, DelNery E and Soleilhac E
High Content Screening in chemical biology: Overview and main challenges.
Médecine Sciences, 2015, 31(2): 187-96

Champleboux M and Govin J
Bromodomains shake the hegemony of pan-acetyl antibodies.
Proteomics, 2015, 15(9): 1457-1458

Chassefeyre R, Martinez-Hernandez J, Bertaso F, Bouquier N, Blot B, Laporte M, Fraboulet S, Couté Y, Devoy A, Isaacs AM, Pernet-Gallay K, Sadoul R, Fagni L and Goldberg Y
Regulation of postsynaptic function by the dementia-related ESCRT-III subunit CHMP2B.
Journal of Neuroscience, 2015, 35(7): 3155-3173

Couderc C, Bollard J, Couté Y, Massoma P, Poncet G, Lepinasse F, Hervieu V, Gadot N, Sanchez JC, Scoazec JY, Diaz JJ and Roche C
Mechanisms of local invasion in enteroendocrine tumors: Identification of novel candidate cytoskeleton-associated proteins in an experimental mouse model by a proteomic approach and validation in human tumors.
Molecular and Cellular Endocrinology, 2015, 399: 154-163

Court M, Garin J and Masselon CD
Urine sample preparation and fractionation for global proteome profiling by LC-MS.
Methods in Molecular Biology, 2015, 1243: 175-186

Desroches-Castan A, Quelard D, Demeunynck M, Constant JF, Dong C, Keramidas M, Coll JL, Barette C, Lafanechere L and Feige JJ
A new chemical inhibitor of angiogenesis and tumorigenesis that targets the VEGF signaling pathway upstream of Ras.
Oncotarget, 2015, 6(7): 5382-5411

Diakite MLY, Rollin J, Jary D, Berthier J, Mourton-Gilles C, Sauvaire D, Philippe C, Delapierre G and Gidrol X
Point-of-care diagnostics for ricin exposure.
Lab on a Chip - Miniaturisation for Chemistry and Biology, 2015, 15(10): 2308-2317

Dolega ME, Abeille F, Picollet-D’hahan N and Gidrol X
Controlled 3D culture in Matrigel microbeads to analyze clonal acinar development.
Biomaterials, 2015, 52: 347-357

Dupre M, Gilquin B, Fenaille F, Feraudet-Tarisse C, Dano J, Ferro M, Simon S, Junot C, Brun V and Becher F
Multiplex quantification of protein toxins in human biofluids and food matrices using immunoextraction and high-resolution targeted mass spectrometry.
Analytical Chemistry, 2015, 87(16): 8473-8480

Gabriel M, Balle D, Bigault S, Pornin C, Getin S, Perraut F, Block MR, Chatelain F, Picollet-D'hahan N, Gidrol X and Haguet V
Time-lapse contact microscopy of cell cultures based on non-coherent illumination.
Scientific Reports, 2015, 5: article 14532

Gentil Dit Maurin A, Lemercier C, Collin-Faure V, Marche PN, Jouvin-Marche E and Candeias SM
Developmental regulation of p53-dependent radiation-induced thymocyte apoptosis in mice.
Clinical and Experimental Immunology, 2015, 179(1): 30-38

Guyon L, Lajaunie C, Fer F, Bhajun R, Sulpice E, Pinna G, Campalans A, Radicella JP, Rouillier P, Mary M, Combe S, Obeid P, Vert JP and Gidrol X
Φ-score: A cell-to-cell phenotypic scoring method for sensitive and selective hit discovery in cell-based assays.
Scientific Reports, 2015, 5: Article number 14221

Homolka D, Pandey RR, Goriaux C, Brasset E, Vaury C, Sachidanandam R, Fauvarque MO and Pillai RS
PIWI slicing and RNA elements in precursors instruct directional primary piRNA biogenesis.
Cell Reports, 2015, 12(3): 418-428

Hu J, Donahue G, Dorsey J, Govin J, Yuan Z, Garcia BA, Shah PP and Berger SL
H4K44 acetylation facilitates chromatin accessibility during meiosis.
Cell Reports, 2015, 13(9): 1772-1780

Jacomin AC, Bescond A, Soleilhac E, Gallet B, Schoehn G, Fauvarque MO and Taillebourg E
The deubiquitinating enzyme UBPY is required for lysosomal biogenesis and productive autophagy in Drosophila.
PLoS One, 2015, 10(11): e0143078

Kessentini Y, Burger T and Paquet T
A Dempster-Shafer Theory based combination of handwriting recognition systems with multiple rejection strategies.
Pattern Recognition, 2015, 48(2): 534-544

Lebert D, Louwagie M, Goetze S, Picard G, Ossola R, Duquesne C, Basler K, Ferro M, Rinner O, Aebersold R, Garin J, Mouz N, Brunner E and Brun V
DIGESTIF: A universal quality standard for the control of bottom-up proteomics experiments.
Journal of Proteome Research, 2015, 14(2): 787-803

Lebert D, Picard G, Beau-Larvor C, Troncy L, Lacheny C, Maynadier B, Low W, Mouz N, Brun V, Klinguer-Hamour C, Jaquinod M and Beck A
Absolute and multiplex quantification of antibodies in serum using PSAQ™ standards and LC-MS/MS.
Bioanalysis, 2015, 7(10): 1237-1251

Legendre M, Lartigue A, Bertaux L, Jeudy S, Bartoli J, Lescot M, Alempic JM, Ramus C, Bruley C, Labadie K, Shmakova L, Rivkina E, Couté Y, Abergel C and Claverie JM
In-depth study of Mollivirus sibericum, a new 30,000-yold giant virus infecting Acanthamoeba.
Proceedings of the National Academy of Sciences of the USA, 2015, 112(38): E5327-E5335

Lemercier C
When our genome is targeted by pathogenic bacteria.
Cellular and Molecular Life Sciences, 2015, 72(14): 2665-2676

Lemercier C
Self-duplication of differentiated acinar cells during salivary gland growth and regeneration.
Médecine Sciences, 2015, 31(8-9): 712-714

Martinez A, Soleilhac E, Barette C, Prudent R, Gozzi GJ, Vassal-Stermann E, Pillet C, Pietro AD, Fauvarque MO and Lafanechere L
Novel synthetic pharmacophores inducing a stabilization of cellular microtubules.
Current Cancer Drug Targets, 2015, 15(1): 2-13

Mazzoleni M, Figuet S, Martin-Laffon J, Mininno M, Gilgen A, Leroux M, Brugiere S, Tardif M, Alban C and Ravanel S
Dual-targeting of the protein methyltransferase PrmA contributes to both chloroplastic and mitochondrial ribosomal protein L11 methylation in Arabidopsis.
Plant & Cell Physiology, 2015, 56(9): 1697-1710

Minguet EG, Segard S, Charavay C and Parcy F
MORPHEUS, a Webtool for transcription factor binding analysis using position weight matrices with dependency.
PLoS One, 2015, 10(8): e0135586

Mladenov P, Finazzi G, Bligny R, Moyankova D, Zasheva D, Boisson AM, Brugière S, Krasteva V, Alipieva K, Simova S, Tchorbadjieva M, Goltsev V, Ferro M, Rolland N and Djilianov D
In vivo spectroscopy and NMR metabolite fingerprinting approaches to connect the dynamics of photosynthetic and metabolic phenotypes in resurrection plant Haberlea rhodopensis during desiccation and recovery.
Frontiers Plant Science, 2015, 6: 564

Murie C, Barette C, Button J, Lafanechère L and Nadon R
Improving detection of rare biological events in High-Throughput Screens.
Journal of Biomolecular Screening, 2015, 20(2): 230-241

Penzo M, Rocchi L, Brugiere S, Carnicelli D, Onofrillo C, Couté Y, Brigotti M and Montanaro L
Human ribosomes from cells with reduced dyskerin levels are intrinsically altered in translation.
FASEB Journal, 2015, 29(8): 3472-3482

Perrin J, Mortier M, Jacomin AC, Viargues P, Thevenon D and Fauvarque MO
The nonaspanins TM9SF2 and TM9SF4 regulate the plasma membrane localization and signalling activity of the peptidoglycan recognition protein PGRP-LC in Drosophila.
Journal of Innate Immunity, 2015, 7(1): 37-46

Pichon F, Destercke S and Burger T
A consistency-specificity trade-off to select source behavior in information fusion.
Ieee Transactions on Cybernetics, 2015, 45(4): 598-609

Reichmann D, Couté Y and Ollagnier de Choudens S
Dual activity of quinolinate synthase: Triose phosphate isomerase and dehydration activities play together to form quinolinate.
Biochemistry, 2015, 54(42): 6443-6446

Robinson S, Guyon L, Nevalainen J, Toriseva M, Åkerfelt M and Nees M
Segmentation of image data from complex organotypic 3D models of cancer tissues with markov random fields.
PLoS One, 2015, 10(12): e0143798

Le Roux C, Huet G, Jauneau A, Camborde L, Trémousaygue D, Kraut A, Zhou B, Levaillant M, Adachi H, Yoshioka H, Raffaele S, Berthomé R, Couté Y, Parker JE and Deslandes L
A receptor pair with an integrated decoy converts pathogen disabling of transcription factors to immunity.
Cell, 2015, 161(5): 1074-1088

Sage E, Brenac A, Alava T, Morel R, Dupre C, Hanay MS, Roukes ML, Duraffourg L, Masselon C and Hentz S
Neutral particle mass spectrometry with nanomechanical systems.
Nature Communications, 2015, 6: 6482

Senegas A, Gautheron J, Gentil Dit Maurin A and Courtois G
IKK-related genetic diseases: Probing NF-κB functions in humans and other matters.
Cellular and Molecular Life Sciences, 2015, 72(7): 1275-1287

Vaillier C, Honegger T, Kermarrec F, Gidrol X and Peyrade D
Involvement of membrane proteins and ion channels on the self-rotation of human cells in a non-rotating AC electric field.
Electrophoresis, 2015, 36(9-10): 1123-1129

Vanhove AS, Duperthuy M, Charriere GM, Le Roux F, Goudenege D, Gourbal B, Kieffer-Jaquinod S, Couté Y, Wai SN and Destoumieux-Garzon D
Outer membrane vesicles are vehicles for the delivery of Vibrio tasmaniensis virulence factors to oyster immune cells.
Environmental Microbiology, 2015, 17(4): 1152-1165