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Publications du laboratoire en 2013

Publié le 4 août 2022
Agaësse G, Barbollat-Boutrand L, Sulpice E, Combe S, Obeid P, Kharbili ME, Lamartine J, Gidrol X, Berthier-Vergnes O and Masse I
Identification des régulateurs transcriptionnels de la tétraspanine-8 dans l’invasion précoce du mélanome cutané.
Annales de Dermatologie et de Vénéréologie, 2013, 140(12, Supplement 1): S638-S639

Aubry L, Guetta D and Klein G
Variations around the arrestin fold. In Advances in Genome Science: Changing Views on Living Organisms, Edited by Neri Ce, 2013, pp 342-366

Aubry L and Klein G
True arrestins and arrestin-fold proteins: A structure-based appraisal. In Progress in Molecular Biology and Translational Science: The Molecular Biology of Arrestins, Edited by Luttrell LM, Academic Press, 2013, vol 118, pp 21-56

Bougdour A, Durandau E, Brenier-Pinchart MP, Ortet P, Barakat M, Kieffer S, Curt-Varesano A, Curt-Bertini RL, Bastien O, Coute Y, Pelloux H and Hakimi MA
Host cell subversion by Toxoplasma GRA16, an exported dense granule protein that targets the host cell nucleus and alters gene expression.
Cell Host & Microbe, 2013, 13(4): 489-500

Bounab Y, Hesse AM, Iannascoli B, Grieco L, Coute Y, Niarakis A, Roncagalli R, Lie E, Lam KP, Demangel C, Thieffry D, Garin J, Malissen B and Daeron M
Proteomic analysis of the SLP76 interactome in resting and activated primary mast cells.
Molecular and Cellular Proteomics, 2013, 12(10): 2874-2889

Boussouar A, Barette C, Nadon R, Saint-Léger A, Broucqsault N, Ottaviani A, Firozhoussen A, Lu Y, Lafanechère L, Gilson E, Magdinier F and Ye J
Acacetin and chrysin, two polyphenolic compounds, alleviate telomeric position effect in human cells.
Molecular Therapy. Nucleic Acids, 2013, 2: e116

Braun L, Brenier-Pinchart MP, Yogavel M, Curt-Varesano A, Curt-Bertini RL, Hussain T, Kieffer-Jaquinod S, Coute Y, Pelloux H, Tardieux I, Sharma A, Belrhali H, Bougdour A and Hakimi MA
A Toxoplasma dense granule protein, GRA24, modulates the early immune response to infection by promoting a direct and sustained host p38 MAPK activation.
Journal of Experimental Medicine, 2013, 210(10): 2071-2086

Bruniaux J, Sulpice E, Mittler F, Texier I, Gidrol X and Navarro FP
Cationic lipid nanoemulsions for RNAi screening. Proceedings of the Technical Proceedings of the 2013 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2013, Washington, DC; United States; 12 May 2013 through 16 May 2013,vol 3, pp. 323-326

Burger T and Destercke S
How to randomly generate mass functions.
International Journal of Uncertainty Fuzziness and Knowledge-Based Systems, 2013, 21(5): 645-673

Camelo S, Raoul W, Lavalette S, Calippe B, Cristofaro B, Levy O, Houssier M, Sulpice E, Jonet L, Klein C, Devevre E, Thuret G, Duarte A, Eichmann A, Leconte L, Guillonneau X and Sennlaub F
Delta-like 4 inhibits choroidal neovascularization despite opposing effects on vascular endothelium and macrophages.
Angiogenesis, 2012, 15(4): 609-622
Erratum in Angiogenesis, 2013, 16(2): 479-480

Casabona MG, Silverman JM, Sall KM, Boyer F, Coute Y, Poirel J, Grunwald D, Mougous JD, Elsen S and Attree I
An ABC transporter and an outer membrane lipoprotein participate in posttranslational activation of type VI secretion in Pseudomonas aeruginosa.
Environmental Microbiology, 2013, 15(2): 471-486

Casabona MG, Vandenbrouck Y, Attree I and Coute Y
Proteomic characterization of Pseudomonas aeruginosa PAO1 inner membrane.
Proteomics, 2013, 13(16): 2419-2423

Chapel A, Kieffer-Jaquinod S, Sagne C, Verdon Q, Ivaldi C, Mellal M, Thirion J, Jadot M, Bruley C, Garin J, Gasnier B and Journet A
An extended proteome map of the lysosomal membrane reveals novel potential transporters.
Molecular & Cellular Proteomics, 2013, 12(6): 1572-1588

Courty N and Burger T
A kernel view on manifold sub-sampling based on Karcher variance optimization.
Accepted to Geometric Sciences of Information (GSI 2013), LNCS 8085, pp. 751-758, Paris, France, July 2013.

Dell'aglio E, Giustini C, Salvi D, Brugiere S, Delpierre F, Moyet L, Baudet M, Seigneurin-Berny D, Matringe M, Ferro M, Rolland N and Curien G
Complementary biochemical approaches applied to the identification of plastidial calmodulin-binding proteins.
Molecular BioSystems, 2013, 9(6): 1234-1248

Deshiere A, Duchemin-Pelletier E, Spreux E, Ciais D, Combes F, Vandenbrouck Y, Couté Y, Mikaelian I, Giusiano S, Charpin C, Cochet C and Filhol O
Unbalanced expression of CK2 kinase subunits is sufficient to drive epithelial-to-mesenchymal transition by Snail1 induction.
Oncogene, 2013, 32: 1373-1383

Destercke S and Burger T
Toward an axiomatic definition of conflict between belief functions.
IEEE Transactions on Cybernetics, 2013, 43(2): 585-596

Dolega ME, Allier C, Vinjimore Kesavan S, Gerbaud S, Kermarrec F, Marcoux P, Dinten J-M, Gidrol X and Picollet-D’Hahan N
Label-free analysis of prostate acini-like 3D structures by lensfree imaging.
Biosensors and Bioelectronics, 2013, 49: 176-183

Duan C, Adam V, Byrdin M, Ridard J, Kieffer-Jaquinod S, Morlot C, Arcizet D, Demachy I and Bourgeois D
Structural evidence for a two-regime photobleaching mechanism in a reversibly switchable fluorescent protein.
Journal of the American Chemical Society, 2013, 135(42): 15841-15850

Elsen S, Collin-Faure V, Gidrol X and Lemercier C
The opportunistic pathogen Pseudomonas aeruginosa activates the DNA double-strand break signaling and repair pathway in infected cells.
Cellular and Molecular Life Sciences, 2013, 70: 4385-4397

Emadali A, Rousseaux S, Bruder-Costa J, Rome C, Duley S, Hamaidia S, Betton P, Debernardi A, Leroux D, Bernay B, Kieffer-Jaquinod S, Combes F, Ferri E, McKenna CE, Petosa C, Bruley C, Garin J, Ferro M, Gressin R, Callanan MB and Khochbin S
Identification of a novel BET bromodomain inhibitor-sensitive, gene regulatory circuit that controls Rituximab response and tumour growth in aggressive lymphoid cancers.
EMBO Molecular Medicine, 2013, 5(8): 1180-1195

Forouhar F, Arragain S, Atta M, Gambarelli S, Mouesca JM, Hussain M, Xiao R, Kieffer-Jaquinod S, Seetharaman J, Acton TB, Montelione GT, Mulliez E, Hunt JF and Fontecave M
Two Fe-S clusters catalyze sulfur insertion by radical-SAM methylthiotransferases.
Nature Chemical Biology, 2013, 9(5): 333-338

Freida D, Lecourt S, Cras A, Vanneaux V, Letort G, Gidrol X, Guyon L, Larghero J and Thery M
Human bone marrow mesenchymal stem cells regulate biased DNA segregation in response to cell adhesion asymmetry.
Cell Reports, 2013, 5(3): 601-610

Govin J and Khochbin S
Histone variants and sensing of chromatin functional states.
Nucleus, 2013, 4(6)

Grelier A, Cras A, Balitrand N, Delmau C, Lecourt S, Lepelletier Y, Riesterer H, Freida D, Lataillade JJ, Lebousse-Kerdiles MC, Cuccini W, Peffault de Latour R, Marolleau JP, Uzan G, Larghero J and Vanneaux V
Toll-like receptor 3 regulates cord blood-derived endothelial cell function in vitro and in vivo.
Angiogenesis, 2013, 16(4): 821-836

Habourdin C, Klein G, Araki T, Williams JG and Aubry L
The arrestin-domain containing protein AdcA is a response element to stress.
Cell Communication and Signaling, 2013, 11(91)

Habif G, Grasset MF, Kieffer-Jaquinod S, Kuhn L, Mouchiroud G and Gobert-Gosse S
Phosphoproteome analyses reveal specific implications of Hcls1, p21-activated kinase 1 and Ezrin in proliferation of a myeloid progenitor cell line downstream of wild-type and ITD mutant Fms-like tyrosine kinase 3 receptors.
Journal of Proteomics, 2013, 78: 231-244

Haguet V, Obeid P, Griffin R, Freida D and Gidrol X
Parallelized lensfree time-lapse microscopy.
Proceedings of the NanoBioEurope, Toulouse, France, June 10-12, pp. 30

Haguet V, Obeid P, Griffin R, Freida D, Guyon L and Gidrol X
Time-lapse screening by parallelized lensfree imaging.
Proceedings of the 17th International Conference on Miniaturized Systems for Chemistry and Life Sciences (µTAS), Freiburg, Germany, October 27-31, 2013, pp. 1740-1742

Hajj Chehade M, Loiseau L, Lombard M, Pecqueur L, Ismail A, Smadja M, Golinelli-Pimpaneau B, Mellot-Draznieks C, Hamelin O, Aussel L, Kieffer-Jaquinod S, Labessan N, Barras F, Fontecave M and Pierrel F
ubiI, a new gene in Escherichia coli Coenzyme Q biosynthesis, is involved in aerobic C5-hydroxylation.
Journal of Biological Chemistry, 2013, 288(27): 20085-20092

Lecourt S, Mouly E, Freida D, Cras A, Ceccaldi R, Heraoui D, Chomienne C, Marolleau JP, Arnulf B, Porcher R, Caillaud C, Vanneaux V, Belmatoug N and Larghero J

A prospective study of bone marrow hematopoietic and mesenchymal stem cells in type 1 Gaucher disease patients.
PLoS One, 2013, 8(7): e69293

Lemercier C and Elsen S
Pseudomonas aeruginosa prise en flagrant délit de casse ! .
Médecine Sciences, 2013, 11: 949-950

Liu J, Bombera R, Leroy L, Roupioz Y, Baganizi DR, Marche PN, Haguet V, Mailley P and Livache T
Selective individual primary cell capture using locally bio-functionalized micropores.
PLoS One, 2013, 8(3): e57717

Murie C, Barette C, Lafanechere L and Nadon R
Single assay-wide variance experimental (SAVE) design for high-throughput screening.
Bioinformatics, 2013, 29(23): 3067-3072

Philippe N, Legendre M, Doutre G, Couté Y, Poirot O, Lescot M, Arslan D, Seltzer V, Bertaux L, Bruley C, Garin J, Claverie JM and Abergel C
Pandoraviruses: Amoeba viruses with genomes up to 2.5 Mb reaching that of parasitic eukaryotes.
Science, 2013, 341(6143): 281-286

Pichon F, Destercke S and Burger T
Selecting source behavior in information fusion on the basis of consistency and specificity.
The Twelfth European Conference on Symbolic and Quantitative Approaches to Reasoning with Uncertainty (ECSQARU 2013), LNAI 7958, pp. 473–484, Utrecht, The Netherlands, July 2013

Picollet-D'hahan N, Gerbaud S, Kermarrec F, Alcaraz JP, Obeid P, Bhajun R, Guyon L, Sulpice E, Cinquin P, Dolega ME, Wagh J, Gidrol X and Martin DK
The modulation of attachment, growth and morphology of cancerous prostate cells by polyelectrolyte nanofilms.
Biomaterials, 2013, 34(38): 10099-10108

Pitaval A, Christ A, Curtet A, Tseng Q and Théry M
Probing ciliogenesis using micropatterned substrates.
Methods in Enzymology, 2013, 525: 109-130

Prudent R, Soleilhac E, Barette C, Fauvarque MO and Lafanechère L
Phenotypic screens or one stone to kill two birds: Discover the target and its pharmacological regulator.
Médecine Sciences, 2013, 29(10): 897-905

Prudent R, Vassal-Stermann E, Nguyen CH, Mollaret M, Viallet J, Desroches-Castan A, Martinez A, Barette C, Pillet C, Valdameri G, Soleilhac E, Di Pietro A, Feige JJ, Billaud M, Florent JC and Lafanechère L
Azaindole derivatives are inhibitors of microtubule dynamics, with anti-cancer and anti-angiogenic activities.
British Journal of Pharmacology, 2013, 168: 673–68

Robert-Genthon M, Casabona MG, Neves D, Couté Y, Cicéron F, Elsen S, Dessen A and Attrée I
Unique features of a Pseudomonas aeruginosa α2-macroglobulin homolog.
MBio, 2013, 4(4): e00309-13

Smith LM,  Kelleher NL & The Consortium for Top Down Proteomics
Proteoform: A single term describing protein complexity.
Nature Methods, 2013, 10: 186–187

Terman DS, Serier A, Dauwalder O, Badiou C, Dutour A, Thomas D, Brun V, Bienvenu J, Etienne J, Vandenesch F and Lina G
Staphylococcal enterotoxins of the enterotoxin gene cluster (egcSEs) induce nitrous oxide- and cytokine dependent tumor cell apoptosis in a broad panel of human tumor cells.
Frontiers in Cellular and Infection Microbiology, 2013, 3: 38

van Lis R, Baffert C, Coute Y, Nitschke W and Atteia A
Chlamydomonas reinhardtii chloroplasts contain a homodimeric pyruvate: Ferredoxin oxidoreductase that functions with FDX1.
Plant Physiology, 2013, 161(1): 57-71

Zaccaria A, Bouamrani A, Selek L, El Atifi M, Hesse AM, Ratel D, Juhem A, Mathieu H, Couté Y, Bruley C, Garin J, Benabid AL, Chabardes S, Piallat B and Berger F
A micro silicon chip for in vivo cerebral imprint in monkey. 
ACS Chemical Neuroscience, 2013, 4(3): 385-392