Vous êtes ici : Accueil > Équipe Biomics > Publications de l'équipe Biomics

Publications de l'équipe Biomics

Publié le 19 février 2019


Publications 2018 - 2017 - 2016 - 2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008 - 2007 - 2006 - 2005 - 2004 - 2003 - 2002


2018 


d'Alessandro J, Mas L, Aubry L, Rieu JP, Riviere C and Anjard C
Collective regulation of cell motility using an accurate density-sensing system.
Journal of the Royal Society Interface, 2018, 15(140): Article Number 20180006

Allier C, Vincent R, Navarro F, Menneteau M, Ghenim L, Gidrol X, Bordy T, Herve L, Cioni O, Bardin S, Bornens M, Usson Y and Morales S
Dynamic quantitative analysis of adherent cell cultures by means of lens-free video microscopy.
Proceedings of the Conference on Quantitative Phase Imaging IV, Popescu G and Park Y Eds, 2018, vol 10503, 12 p.

Allier C, Vincent R, Navarro F, Menneteau M, Ghenim L, Gidrol X, Bordy T, Herve L, Cioni O, Bardin S, Bornens M, Usson Y and Morales S
Lens-free video microscopy for the dynamic and quantitative analysis of adherent cell culture.
Journal of Visualized Experiments: JoVE, 2018, (132)

Berdeu A, Laperrousaz B, Bordy T, Mandula O, Morales S, Gidrol X, Picollet-D'hahan N and Allier C
Lens-free microscopy for 3D + time acquisitions of 3D cell culture.
Scientific Reports, 2018, 8(1): 16135

Berdeu A, Laperrousaz B, Bordy T, Morales S, Gidrol X, Picollet-D'Hahan N and Allier C
3D+time acquisitions of 3D cell culture by means of lens-free tomographic microscopy.
Proceedings of the Progress in Biomedical Optics and Imaging - Proceedings of SPIE, vol 10499, Article number 1049909

González-Torres A, Bañuelos-Villegas EG, Martínez-Acuña N, Sulpice E, Gidrol X and Alvarez-Salas LM
MYPT1 is targeted by miR-145 inhibiting viability, migration and invasion in 2D and 3D HeLa cultures.
Biochemical and Biophysical Research Communications, 2018, 507(1-4): 348-54

Laperrousaz B, Porte S, Gerbaud S, Härmä V, Kermarrec F, Hourtane V, Bottausci F, Gidrol X and Picollet-D’hahan N
Direct transfection of clonal organoids in Matrigel microbeads: A promising approach toward organoid-based genetic screens.
Nucleic Acids Research, 2018, 46(12): e70

Picollet-D'Hahan N, Laperrousaz B, Porte S, Obeid P, Tollance A, Kermarrec F, Belda-Marin C, Romero-Millan A, Haguet V, Martin DK and Gidrol X
Encapsulated organoids & organ-on-a-chip platform for cancer modeling.
Proceedings of the Technical Digest - 63rd IEEE International Electron Devices Meeting, IEDM 2017, vol Part F134366, pp. 10.16.11-10.16.14

Picollet-D’hahan N, Tollance A, Belda Marin C, Liguori L, Marquette C, Filhol-Cochet O, Vilgrain I, Laffitte G, Rivera F, Alcaraz JP, Thélu J, Nicoud O, Moufle-Milot T, Legues M, Bouamrani A, Mombrun A, Gilquin B, Gerbaud S, Obeid P, Kermarrec F, Gidrol X and Martin DK
3D polyelectrolyte scaffolds to mimic exocrine glands: A step towards a prostate-on-chip platform.
The EuroBiotech Journal, 2018, 2(4): 180-195

Polizzi S, Laperrousaz B, Perez-Reche FJ, Nicolini FE, Satta VM, Arneodo A and Argoul F
A minimal rupture cascade model for living cell plasticity.
New Journal of Physics, 2018, 20: Article Number 053057


2017 


Agaesse G, Barbollat-Boutrand L, Sulpice E, Bhajun R, Kharbili ME, Berthier-Vergnes O, Degoul F, de la Fouchardiere A, Berger E, Voeltzel T, Lamartine J, Gidrol X and Masse I
A large-scale RNAi screen identifies LCMR1 as a critical regulator of Tspan8-mediated melanoma invasion.
Oncogene, 2017, 36(4): 446-457

Allier C, Morel S, Vincent R, Ghenim L, Navarro F, Menneteau M, Bordy T, Herve L, Cioni O, Gidrol X, Usson Y and Dinten JM
Imaging of dense cell cultures by multiwavelength lens-free video microscopy.
Cytometry A, 2017, 91(5): 433-442

Berdeu A, Momey F, Dinten JM, Gidrol X, Picollet-D'Hahan N and Allier C
Lensfree diffractive tomography for the imaging of 3D cell cultures. In Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XXIV, edited by Brown TG, Cogswell CJ and Wilson T, Series: Proceedings of SPIE, Spie-Int Soc Optical Engineering, 2017, vol. 10070, Article Number UNSP 1007008

Berdeu A, Momey F, Laperrousaz B, Bordy T, Gidrol X, Dinten JM, Picollet-D'Hahan N and Allier C
Comparative study of fully three-dimensional reconstruction algorithms for lens-free microscopy.
Applied Optics, 2017, 56(13): 3939-3951

Berdeu A, Momey F, Laperrousaz B, Bordy T, Gidrol X, Dinten JM, Picollet-D'hahan N and Allier C
3D lens-free time-lapse microscopy for 3D cell culture In Advances in Microscopic Imaging, edited by Beaurepaire E, Pavone FS and So PTC, Series: Proceedings of SPIE, Spie-Int Soc Optical Engineering, 2017, vol.10414, p. Article number UNSP 104140C

El Helou R, Pinna G, Cabaud O, Wicinski J, Bhajun R, Guyon L, Rioualen C, Finetti P, Gros A, Mari B, Barbry P, Bertucci F, Bidaut G, Harel-Bellan A, Birnbaum D, Charafe-Jauffret E and Ginestier C
miR-600 acts as a bimodal switch that regulates breast cancer stem cell fate through WNT signaling.
Cell Reports, 2017, 18(9): 2256-2268

Gidrol X, Laperrousaz B, Obeid P, Porte S, Gerbaud S, Kermarrec F, Haguet V, Dolega ME, Le Priol C, Allier C and Picollet D'Hahan N
Organoids-based high content screening in oncology.
Proceedings of the BioBeirut 7 International Meeting, Beyrouth, Liban, November 16-17 2017

Mittler F, Obeïd P, Rulina AV, Haguet V, Gidrol X and Balakirev MY
High-content monitoring of drug effects in a 3D spheroid model.
Frontiers in Oncology, 2017, 7(DEC): Article number 293

Picollet-D’hahan N, Dolega ME, Freida D, Martin DK and Gidrol X
Deciphering cell intrinsic properties: A key issue for robust organoid production.
Trends in Biotechnology, 2017, 35(1): 1035-1048

Picollet-D'hahan N, Laperrousaz B, Porte S, Obeid P, Tollance A, Kermarrec F, Belda-Marin C, Romero-Millan A, Haguet V, Martin DK and Gidrol X
Encapsulated organoids & organ-on-a-chip platform for cancer modeling.
Proceedings of the 2017 IEEE Annual International Electron Devices Meeting San Francisco, CA, 02-06 december 2017

Robinson S, Nevalainen J, Pinna G, Campalans A, Radicella JP and Guyon L
Incorporating interaction networks into the determination of functionally related hit genes in genomic experiments with Markov random fields.
Bioinformatics, 2017, 33(14): I170-I179

Semenov S, Haguet V, Jeandey C and Antoni M
Experimental investigation of the evaporation of droplets in diamagnetic levitation.
Colloque Annuel du Groupement de recherche "Microgravité Fondamentale et Appliquée" (GDR MFA 2799), Fréjus, France, November 8-10, 2017


2016 

Bhajun R, Guyon L and Gidrol X
MicroRNA degeneracy and pluripotentiality within a Lavallière-tie architecture confers robustness to gene expression networks.
Cellular and Molecular Life Sciences, 2016, 73(15): 2821-2827

Gay O, Gilquin B, Assard N, Stuelsatz P, Delphin C, Lachuer J, Gidrol X and Baudier J
Refilins are short-lived Actin-bundling proteins that regulate lamellipodium protrusion dynamics.
Biology Open, 2016, 5(10): 1351-1361

Momey F, Berdeu A, Bordy T, Dinten JM, Kermarrec Marcel F, Picollet-D’hahan N, Gidrol X and Allier C
Lensfree diffractive tomography for the imaging of 3D cell cultures.
Biomedical Optics Express, 2016, 7(3): 949-962

Picollet-D'hahan N, Dolega ME, Liguori L, Marquette C, Le Gac S, Gidrol X and Martin DK
A 3D toolbox to enhance physiological relevance of human tissue models.
Trends in Biotechnology, 2016, 34(9): 757-769

Rulina AV, Mittler F, Obeid P, Gerbaud S, Guyon L, Sulpice E, Kermarrec F, Assard N, Dolega ME, Gidrol X and Balakirev MY
Distinct outcomes of CRL-Nedd8 pathway inhibition reveal cancer cell plasticity.
Cell Death and Disease, 2016, 7(12): Article number e2505

Vaillier C, Honegger T, Kermarrec F, Gidrol X and Peyrade D
Label-free electric monitoring of human cancer cells as a potential diagnostic tool.
Analytical Chemistry, 2016, 88(18): 9022-9028


2015 

Abeille F, Vinjimore Kesavan S, Dolega ME, Gerbaud S, Allier C , Pouteau P, Icard B, Agache V, Gidrol X and Picollet-D’hahan N
Culture conditions can counterbalance the thermosensitive properties of Poly (N-isopropylacrylamide) during cell harvesting.
Journal of Bioprocessing & Biotechniques, 2015, 5(3): 2017

Akerfelt M, Bayramoglu N, Robinson S, Toriseva M, Schukov HP, Harma V, Virtanen J, Sormunen R, Kaakinen M, Kannala J, Eklund L, Heikkila J and Nees M
Automated tracking of tumor-stroma morphology in microtissues identifies functional targets within the tumor microenvironment for therapeutic intervention.
Oncotarget, 2015, 6(30): 30035-30056

Allier CP, Kesavan SV, Cioni O, Momey F, Bordy T, Herve L, Morel S, Navarro F, Menneteau M, Chalmond B, Freida D, Sulpice E, Gidrol X and Dinten JM
Lensfree video microscopy: High throughput monitoring and cell tracking of 2D cell cultures.
Proceedings of the Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Advanced Microscopy Techniques IV; and Neurophotonics II, Munich, Germany, June 24-25, 2015, vol 9536, Article number UNSP 95360J

Balakirev MY, Mullally JE, Favier A, Assard N, Sulpice E, Lindsey DF, Rulina AV, Gidrol X and Wilkinson KD
Wss1 metalloprotease partners with Cdc48/Doa1 in processing genotoxic SUMO conjugates.
eLife, 2015, 4(September2015): number e06763

Benzina S, Pitaval A, Lemercier C, Lustremant C, Frouin V, Wu N, Papine A, Soussaline F, Romeo PH and Gidrol X
A kinome-targeted RNAi-based screen links FGF signaling to H2AX phosphorylation in response to radiation.
Cellular and Molecular Life Sciences, 2015, 72(18): 3559-3573

Bhajun R, Guyon L, Pitaval A, Sulpice E, Combe S, Obeid P, Haguet V, Ghorbel I, Lajaunie C and Gidrol X
A statistically inferred microRNA network identifies breast cancer target miR-940 as an actin cytoskeleton regulator.
Scientific Reports, 2015, 5: article number: 8336

Diakite MLY, Rollin J, Jary D, Berthier J, Mourton-Gilles C, Sauvaire D, Philippe C, Delapierre G and Gidrol X
Point-of-care diagnostics for ricin exposure.
Lab on a Chip - Miniaturisation for Chemistry and Biology, 2015, 15(10): 2308-2317

Dolega ME, Abeille F, Picollet-D’hahan N and Gidrol X
Controlled 3D culture in Matrigel microbeads to analyze clonal acinar development.
Biomaterials, 2015, 52: 347-357

Gabriel M, Balle D, Bigault S, Pornin C, Getin S, Perraut F, Block MR, Chatelain F, Picollet-D'hahan N, Gidrol X and Haguet V
Time-lapse contact microscopy of cell cultures based on non-coherent illumination.
Scientific Reports, 2015, 5: article 14532

Gentil Dit Maurin A, Lemercier C, Collin-Faure V, Marche PN, Jouvin-Marche E and Candeias SM
Developmental regulation of p53-dependent radiation-induced thymocyte apoptosis in mice.
Clinical and Experimental Immunology, 2015, 179(1): 30-38

Guyon L, Lajaunie C, Fer F, Bhajun R, Sulpice E, Pinna G, Campalans A, Radicella JP, Rouillier P, Mary M, Combe S, Obeid P, Vert JP and Gidrol X
Φ-score: A cell-to-cell phenotypic scoring method for sensitive and selective hit discovery in cell-based assays.
Scientific Reports, 2015, 5: Article number 14221

Lemercier C
When our genome is targeted by pathogenic bacteria.
Cellular and Molecular Life Sciences, 2015, 72(14): 2665-2676

Lemercier C
Self-duplication of differentiated acinar cells during salivary gland growth and regeneration.
Médecine Sciences, 2015, 31(8-9): 712-714

Robinson S, Guyon L, Nevalainen J, Toriseva M, Åkerfelt M and Nees M
Segmentation of image data from complex organotypic 3D models of cancer tissues with markov random fields.
PLoS One, 2015, 10(12): e0143798

Vaillier C, Honegger T, Kermarrec F, Gidrol X and Peyrade D
Involvement of membrane proteins and ion channels on the self-rotation of human cells in a non-rotating AC electric field.
Electrophoresis, 2015, 36(9-10): 1123-1129


2014 

Abeille F, Mittler F, Obeid P, Huet M, Kermarrec F, Dolega ME, Navarro F, Pouteau P, Icard B, Gidrol X, Agache V and Picollet-D'hahan N
Continuous microcarrier-based cell culture in a benchtop microfluidic bioreactor.
Lab on a Chip, 2014, 14(18): 3510-3518

Allier CP, Kesavan SV, Coutard JG, Cioni O, Momey F, Navarro F, Menneteau M, Chalmond B, Obeid P, Haguet V, David-Watine B, Dubrulle N, Shorte S, van der Sanden B, Di Natale C, Hamard L, Wion D, Dolega ME, Picollet-D'hahan N, Gidrol X and Dinten JM
Video lensfree microscopy of 2D and 3D cultures of cells.
Proceedings of SPIE. Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues Xii, 2014, 8947: n°89471H

Dolega ME, Wagh J, Gerbaud S, Kermarrec F, Alcaraz JP, Martin DK, Gidrol X and Picollet-D'hahan N
Facile bench-top fabrication of enclosed circular microchannels provides 3D confined structure for growth of prostate epithelial cells.
PLoS One, 2014, 9(6): e99416

Ghorbel I, Bertacchi N and Haguet V
Parallelized contact imaging and automated analysis of cell migration dynamics. Proceedings of the 37th International Meeting of the German Society for Cell Biology (DGZ), Ratisbonne, Germany, March 18-21, 2014, pp. 71

Grelier A, Cras A, Balitrand N, Delmau C, Lecourt S, Lepelletier Y, Riesterer H, Freida D, Lataillade JJ, Lebousse-Kerdiles MC, Cuccini W, Peffault de Latour R, Marolleau JP, Uzan G, Larghero J and Vanneaux V
Toll-like receptor 3 regulates cord blood-derived endothelial cell function in vitro and in vivo.
Angiogenesis, 2013, 16(4): 821-836

Griffin R, Binari R and Perrimon N
Genetic odyssey to generate marked clones in Drosophila mosaics.
Proceedings of the National Academy of Sciences, USA, 2014, 111(13): 4756-4763

Kesavan SV, Momey F, Cioni O, David-Watine B, Dubrulle N, Shorte S, Sulpice E, Freida D, Chalmond B, Dinten JM, Gidrol X and Allier C
High-throughput monitoring of major cell functions by means of lensfree video microscopy.
Scientific Reports, 2014, 4: 5942

Lemercier C
[Bacterial infections as seen from the eukaryotic genome: DNA double strand breaks, inflammation and cancer].
Medecine Science (Paris), 2014, 30(8-9): 758-764

Rival A, Jary D, Delattre C, Fouillet Y, Castellan G, Bellemin-Comte A and Gidrol X
An EWOD-based microfluidic chip for single-cell isolation, mRNA purification and subsequent multiplex qPCR.
Lab on a Chip, 2014, 14(19):3739-3749

Sukkurwala AQ, Martins I, Wang Y, Schlemmer F, Ruckenstuhl C, Durchschlag M, Michaud M, Senovilla L, Sistigu A, Ma Y, Vacchelli E, Sulpice E, Gidrol X, Zitvogel L, Madeo F, Galluzzi L, Kepp O and Kroemer G
Immunogenic calreticulin exposure occurs through a phylogenetically conserved stress pathway involving the chemokine CXCL8.
Cell Death and Differentiation, 2014, 21: 59-68

Vaillier C, Honegger T, Kermarrec F, Gidrol X and Peyrade D
Comprehensive analysis of human cells motion under an irrotational AC electric field in an electro-microfluidic chip.
PLoS One, 2014, 9(4): e95231

Wu N and Gidrol X
The wind rose of human keratinocyte cell fate.
Cellular and Molecular Life Sciences, 2014, 289(46): 31765-31776



2013 

Agaësse G, Barbollat-Boutrand L, Sulpice E, Combe S, Obeid P, Kharbili ME, Lamartine J, Gidrol X, Berthier-Vergnes O and Masse I
Identification des régulateurs transcriptionnels de la tétraspanine-8 dans l’invasion précoce du mélanome cutané.
Annales de Dermatologie et de Vénéréologie, 2013, 140(12, Supplement 1): S638-S639

Bruniaux J, Sulpice E, Mittler F, Texier I, Gidrol X and Navarro FP
Cationic lipid nanoemulsions for RNAi screening. Proceedings of the Technical Proceedings of the 2013 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2013, Washington, DC; United States; 12 May 2013 through 16 May 2013,vol 3, pp. 323-326

Camelo S, Raoul W, Lavalette S, Calippe B, Cristofaro B, Levy O, Houssier M, Sulpice E, Jonet L, Klein C, Devevre E, Thuret G, Duarte A, Eichmann A, Leconte L, Guillonneau X and Sennlaub F
Delta-like 4 inhibits choroidal neovascularization despite opposing effects on vascular endothelium and macrophages.
Angiogenesis, 2012, 15(4): 609-622
Erratum in Angiogenesis, 2013, 16(2): 479-480

Dolega ME, Allier C, Vinjimore Kesavan S, Gerbaud S, Kermarrec F, Marcoux P, Dinten J-M, Gidrol X and Picollet-D’Hahan N
Label-free analysis of prostate acini-like 3D structures by lensfree imaging.
Biosensors and Bioelectronics, 2013, 49: 176-183

Elsen S, Collin-Faure V, Gidrol X and Lemercier C
The opportunistic pathogen Pseudomonas aeruginosa activates the DNA double-strand break signaling and repair pathway in infected cells.
Cellular and Molecular Life Sciences, 2013, 70: 4385-4397

Freida D, Lecourt S, Cras A, Vanneaux V, Letort G, Gidrol X, Guyon L, Larghero J and Thery M
Human bone marrow mesenchymal stem cells regulate biased DNA segregation in response to cell adhesion asymmetry.
Cell Reports, 2013, 5(3): 601-610

Grelier A, Cras A, Balitrand N, Delmau C, Lecourt S, Lepelletier Y, Riesterer H, Freida D, Lataillade JJ, Lebousse-Kerdiles MC, Cuccini W, Peffault de Latour R, Marolleau JP, Uzan G, Larghero J and Vanneaux V
Toll-like receptor 3 regulates cord blood-derived endothelial cell function in vitro and in vivo.
Angiogenesis, 2013, 16(4): 821-36

Haguet V, Obeid P, Griffin R, Freida D and Gidrol X
Parallelized lensfree time-lapse microscopy.
Proceedings of the NanoBioEurope, Toulouse, France, June 10-12, pp. 30

Haguet V, Obeid P, Griffin R, Freida D, Guyon L and Gidrol X
Time-lapse screening by parallelized lensfree imaging.
Proceedings of the 17th International Conference on Miniaturized Systems for Chemistry and Life Sciences (µTAS), Freiburg, Germany, October 27-31, 2013, pp. 1740-1742

Lecourt S, Mouly E, Freida D, Cras A, Ceccaldi R, Heraoui D, Chomienne C, Marolleau JP, Arnulf B, Porcher R, Caillaud C, Vanneaux V, Belmatoug N and Larghero J
A prospective study of bone marrow hematopoietic and mesenchymal stem cells in type 1 Gaucher disease patients.
PLoS One, 2013, 8(7): e69293

Lemercier C and Elsen S
Pseudomonas aeruginosa prise en flagrant délit de casse !
Médecine Sciences, 2013, 11: 949-950

Liu J, Bombera R, Leroy L, Roupioz Y, Baganizi DR, Marche PN, Haguet V, Mailley P and Livache T
Selective individual primary cell capture using locally bio-functionalized micropores.
PLoS One, 2013, 8(3): e57717

Picollet-D'hahan N, Gerbaud S, Kermarrec F, Alcaraz JP, Obeid P, Bhajun R, Guyon L, Sulpice E, Cinquin P, Dolega ME, Wagh J, Gidrol X and Martin DK
The modulation of attachment, growth and morphology of cancerous prostate cells by polyelectrolyte nanofilms.
Biomaterials, 2013, 34(38): 10099-10108

Pitaval A, Christ A, Curtet A, Tseng Q and Théry M
Probing ciliogenesis using micropatterned substrates.
Methods in Enzymology, 2013, 525: 109-130



2012 

Bandiera S, Barrey E, Ernoult-Lange M, Gidrol X, Henrion-Caude A, Huang L, Saint-Auret G and Weil D
[Mitochondria, microRNA and RNA interference].
Medecine Science (Paris), 2012, 28(1): 23-26

Barrey E, Jayr L, Mucher E, Gospodnetic S, Joly F, Benech P, Alibert O, Gidrol X, Mata X, Vaiman A and Guerin G
Transcriptome analysis of muscle in horses suffering from recurrent exertional rhabdomyolysis revealed energetic pathway alterations and disruption in the cytosolic calcium regulation.
Animal Genetics, 2012, 43(3): 271-281

Boussaoud A, Fonteille I, Collier G, Kermarrec F, Vermont F, Tresallet E, De Waard M, Arnoult C and Picollet-D’hahan N
A miniaturized planar patch-clamp system for transportable use.
Biosensors and Bioelectronics, 2012, 32(1): 96–103

Camelo S, Raoul W, Lavalette S, Calippe B, Cristofaro B, Levy O, Houssier M, Sulpice E, Jonet L, Klein C, Devevre E, Thuret G, Duarte A, Eichmann A, Leconte L, Guillonneau X and Sennlaub F
Delta-like 4 inhibits choroidal neovascularization despite opposing effects on vascular endothelium and macrophages.
Angiogenesis, 2012, 15(4): 609-622
Erratum to: Delta-like 4 inhibits choroidal neovascularization despite opposing effects on vascular endothelium and macrophages.

Ghenim L, Kaji H, Nishizawa M and Gidrol X
Impedance sensing of biological processes in mammalian cells In Integrated Biomaterials for Biomedical Technology, Edited by Ramalingam M, Tiwari A, Ramakrishna S and Kobayashi H, Wiley, 2012, pp. 293-308

Lecourt S, Vanneaux V, Cras A, Freida D, Heraoui D, Herbi L, Caillaud C, Chomienne C, Marolleau JP, Belmatoug N and Larghero J
Bone marrow microenvironment in an in vitro model of Gaucher disease: Consequences of glucocerebrosidase deficiency.
Stem Cells Development, 2012, 21(2): 239-248

Liu J, Hébert C, Pham P, Sauter-Starace F, Haguet V, Livache T and Mailley P
Electrochemically induced maskless metal deposition on micropore wall.
Small, 2012, 8(9): 1345-1349

Liu J, Pham P, Haguet V, Sauter-Starace F, Leroy L, Roget A, Descamps E, Bouchet A, Buhot A, Mailley P and Livache T
Polarization-induced local pore-wall functionalization for biosensing: from micropore to nanopore.
Analytical Chemistry (Washington), 2012, 84(7): 3254-3261

Menger L, Vacchelli E, Adjemian S, Martins I, Ma Y, Shen S, Yamazaki T, Sukkurwala AQ, Michaud M, Mignot G, Schlemmer F, Sulpice E, Locher C, Gidrol X, Ghiringhelli F, Modjtahedi N, Galluzzi L, André F, Zitvogel L, Kepp O and Kroemer G
Cardiac glycosides exert anticancer effects by inducing immunogenic cell death.
Science Translational Medicine, 2012, 4(143): 143ra99

Merle N, Féraud O, Gilquin B, Hubstenberger A, Kieffer-Jacquinot S, Assard N, Bennaceur-Griscelli A, Honnorat J and Baudier J
ATAD3B is a human embryonic stem cell specific mitochondrial protein, re-expressed in cancer cells, that functions as dominant negative for the ubiquitous ATAD3A.
Mitochondrion, 2012, 12(4): 441-448

Natarajan B, Genovese L, Casida ME, Deutsch T, Burchak ON, Philouze C and Balakirev MY
Wavelet-based linear-response time-dependent density-functional theory.
Chemical Physics, 2012, 402: 29–40

Navarro FP, Berger M, Guillermet S, Josserand V, Guyon L, Neumann E, Vinet F and Texier I
Lipid nanoparticule vectorization of indocyanine green improves fluorescence imaging for tumor diagnosis and lymph node resection.
Journal of Biomedical Nanotechnology, 2012, 8(5): 730-741

Navarro F, Sulpice E and Gidrol X
Des nanovecteurs pour l’ARN interférence thérapeutique.
Biofutur, 2012, 31(333): 30-31

Wu N, Rollin J, Masse I, Lamartine J and Gidrol X
p63 regulates human keratinocyte proliferation via MYC-regulated gene network and differentiation commitment through cell adhesion-related gene network.
Journal of Biological Chemistry, 2012, 287(8): 5627-5638

Wu N, Sulpice E, Obeid P, Benzina S, Kermarrec F, Combe S and Gidrol X
The miR-17 family links p63 protein to MAPK signaling to promote the onset of human keratinocyte differentiation.
PloS One, 2012, 7(9): e45761



2011 

Barrey E, Saint-Auret G, Bonnamy B, Damas D, Boyer O and Gidrol X
Pre-microRNA and mature microRNA in human mitochondria. 
PloS One, 2011, 6(5): e20220

Boussaoud A and Picollet-D'hahan N
Toxint'patch: A briefcase-sized system for toxin detection using planar patch-clamp. Validation of an integrated and automated patch clamp device.
I2M, Instrumentation, Measure, Metrology, 2011, 9-29

Burchak ON, Mugherli L, Ostuni M, Lacapre JJ and Balakirev MY
Combinatorial discovery of fluorescent pharmacophores by multicomponent reactions in droplet arrays.
Journal of the American Chemical Society, 2011, 133(26): 10058-10061

Gaffe J, Lemercier C, Alcaraz JP and Kuntz M
Identification of three tomato flower and fruit MADS-box proteins with a putative histone deacetylase binding domain.
Gene, 2011, 471(1-2): 19-26

Gay O, Gilquin B, Nakamura F, Jenkins ZA, McCartney R, Krakow D, Deshiere A, Assard N, Hartwig JH, Robertson SP and Baudier J
RefilinB (FAM101B) targets filamin A to organize perinuclear actin networks and regulates nuclear shape.
Proceedings of the National Academy of Sciences, 2011, 108(28): 11464-11469

Gay O, Gilquin B, Pitaval A and Baudier J
A link between perinuclear actin bundle dynamics and mechanosensing signaling.
BioArchitecture, 2011, 1(5): 1-5

Gay O, Nakamura F and Baudier J
Refilin holds the cap.
Communicative and Integrative Biology, 2011, 4(6): 791-795

Heil A, Nazmi AR, Koltzscher M, Poeter M, Austermann J, Assard N, Baudier J, Kaibuchi K and Gerke V
S100P is a novel interaction partner and regulator of IQGAP1.
Journal of Biological Chemistry, 2011, 286(9): 7227-7238

Kauffmann P, Ith A, O'Brien D, Gaude V, Boué F, Combe S, Bruckert F, Schaack B, Dempsey NM, Haguet V and Reyne G
Diamagnetically trapped arrays of living cells above micromagnets.
Lab on a Chip - Miniaturisation for Chemistry and Biology, 2011, 11(18): 3153-3161

Kauffmann P, Nussbaumer J, Masse A, Jeandey C, Grateau H, Pham P, Reyne G and Haguet V
Self-arraying of charged levitating droplets.
Analytical Chemistry, 2011, 83(11): 4126-4131

Picollet-D’hahan N
Live cell analysis: When electric detection interfaces microfluidics.
Biochips & Tissue chips, 2011, S1

Saint-Auret G, Danan J-L, Hiron M, Blache C, Sulpice E, Tendil S, Daveau M, Gidrol X and Salier JP
Characterization of the transcriptional signature of C/EBPß isoforms (LAP/LIP) in Hep3B cells: Implication of LIP in pro-survival functions.
Journal of Hepatology, 2011, 54(6): 1185-1194

Wu N, Castel D, Debily MA, Vigano MA, Alibert O, Mantovani R, Iljin K, Romeo PH and Gidrol X
Large scale RNAi screen reveals that the inhibitor of DNA Binding 2 (ID2) Protein is repressed by p53 family member p63 and functions in human keratinocyte differentiation.
Journal of Biological Chemistry, 2011, 286(23): 20870-20879



2010 

Boussaoud A, Fonteille I, Kermarrec F, Arnoult C and Picollet-D'hahan N
A briefcase sized system for toxin detection using planar patch-clamp.
µTAS Pays-Bas, 2010, 339-341

Aude-Garcia C, Collin-Faure V, Bausinger H, Hanau D, Rabilloud T and Lemercier C
Dual roles for MEF2A and MEF2D during human macrophage terminal differentiation and c-Jun expression.
Biochemical Journal, 2010, 430(2): 237-244

Briancon-Marjollet A, Balenci L, Fernandez M, Esteve F, Honnorat J, Farion R, Beaumont M, Barbier E, Remy C and Baudier J
NG2-expressing glial precursor cells are a new potential oligodendroglioma cell initiating population in N-ethyl-N-nitrosourea-induced gliomagenesis.
Carcinogenesis, 2010, 31(10): 1718-1725

Ghenim L, Kaji H, Hoshino Y, Ishibashi T, Haguet V, Gidrol X and Nishizawa M
Monitoring impedance changes associated with motility and mitosis of a single cell.
Lab on a Chip - Miniaturisation for Chemistry and Biology, 2010, 10(19): 2546-2550

Gilquin B, Cannon BR, Hubstenberger A, Moulouel B, Falk E, Merle N, Assard N, Kieffer S, Rousseau D, Wilder PT, Weber DJ and Baudier J
The calcium-dependent interaction between S100B and the mitochondrial AAA-ATPase ATAD3A and the role of this complex in the cytoplasmic processing of ATAD3A.
Molecular and Cellular Biology, 2010, 30(11): 2724-2736

Gilquin B, Taillebourg E, Cherradi N, Hubstenberger A, Gay O, Merle N, Assard N, Fauvarque MO, Tomohiro S, Kuge O and Baudier J
The AAA+ ATPase ATAD3A controls mitochondrial dynamics at the interface of the inner and outer membrane.
Molecular and Cellular Biology, 2010, 30(8): 1984-1996

Huillard E, Ziercher L, Blond O, Wong M, Deloulme JC, Souchelnytskyi S, Baudier J, Cochet C and Buchou T
Disruption of CK2ß in embryonic neural stem cells compromises proliferation and oligodendrogenesis in the mouse telencephalon.
Molecular and Cellular Biology, 2010, 30(11):2737-2749

Jacquot JF, Le Bail JL, Bardet M and Tabony J
Exposure of biological preparations to radiofrequency electromagnetic fields under low gravity.
Review of Scientific Instruments, 2010, 81(11): 115103

Kauffmann P, Pham P, Masse A, Kustov M, Honegger T, Peyrade D, Haguet V and Reyne G
Contactless dielectrophoretic handling of diamagnetic levitating water droplets in air.
IEEE Transactions on Magnetics, 2010, 46(8): 3293-3296

Mercey E, Obeïd P, Glaise D, Calvo-Munoz ML, Guguen-Guillouzo C and Fouqué B
The application of 3D micropatterning of agarose substrate for cell culture and in situ comet assays.
Biomaterials, 2010, 31(12): 3156-3165

Nagarajan M, Veyrieras JB, de Dieuleveult M, Bottin H, Fehrmann S, Abraham AL, Croze S, Steinmetz LM, Gidrol X and Yvert G
Natural single-nucleosome epi-polymorphisms in yeast.
PLoS Genetics, 2010, 6(4): e1000913

Picollet-D'hahan N, Fouqué B and Gidrol X
Translating microtechnologies into tissue engineering, pharmacology and cancer research.
Bio Tech International, 2010, 22(4): 6-9

Pitaval A, Tseng Q, Bornens M and Théry M
Cell shape and contractility regulate ciliogenesis in cell cycle arrested cells.
The Journal of Cell Biology, 2010, 191(2): 303-312

Sordel T, Kermarrec F, Sinquin Y, Fonteille I, Labeau M, Sauter-Starace F, Pudda C, de Crecy F, Chatelain F, De Waard M, Arnoult C and Picollet-D'hahan N
The development of high quality seals for silicon patch-clamp chips.
Biomaterials, 2010, 31(28): 7398-7410

Tabony J
Biological self-organisation by way of reactive processes In Morphogenesis: Origins of patterns and shapes, Bourgine, P. and Lesne, A. Eds., Springer Press, 2010, pp 87-106

Tenenhaus A, Guillemot V, Gidrol X and Frouin V
Gene association networks from microarray data using a regularized estimation of partial correlation based on PLS regression.
IEEE-ACM Transactions on Computational Biology and Bioinformatics, 2010, 7(2): 251-262

Varnier A, Kermarrec F, Blesneac I, Moreau C, Liguori L, Lenormand JL and Picollet-D'hahan N
A simple method for the reconstitution of membrane proteins into giant unilamellar vesicles.
Journal of Membrane Biology, 2010, 233(1-3): 85-92



2009 

Azioune A, Storch M, Bornens M, Thery M and Piel M
Simple and rapid process for single cell micro-patterning.
Lab on a Chip - Miniaturisation for Chemistry and Biology, 2009, 9(11): 1640-1642

Barrey E, Mucher E, Jeansoule N, Larcher T, Guigand L, Herszberg B, Chaffaux S, Guerin G, Mata X, Benech P, Canale M, Alibert O, Maltere P and Gidrol X
Gene expression profiling in equine polysaccharide storage myopathy revealed inflammation, glycogenesis inhibition, hypoxia and mitochondrial dysfunctions.
BMC Veterinary Research, 2009, 5: 29-51

Bouchet A, Descamps E, Mailley P, Livache T, Chatelain F and Haguet V
Contactless electrofunctionalization of a single pore.
Small, 2009, 5(20): 2297-2303

Gabriel M, Picollet-D'hahan N, Block M and Haguet V
Monitoring adherent cells by contact imaging.
µTAS, Corea, 2009, 1: 278-280

Gabriel M, Picollet-D'hahan N, Block M and Haguet V
Monitoring adherent cells by contact imaging.
Proceedings of the 13th International Conference on Miniaturized Systems for Chemistry and Life Sciences (µTAS) 1, 2009, 278-280

Gidrol X, Fouque B, Ghenim L, Haguet V, Picollet-D'hahan N and Schaack B
2D and 3D cell microarrays in pharmacology.
Current Opinion in Pharmacology, 2009, 9(5): 664-668

Griffin R, Sustar A, Bonvin M, Binari R, del Valle Rodriguez A, Hohl AM, Bateman JR, Villalta C, Heffern E, Grunwald D, Bakal C, Desplan C, Schubiger G, Wu CT and Perrimon N
The twin spot generator for differential Drosophila lineage analysis.
Nature Methods, 2009, 6(8): 600-602

Kauffmann P, Chetouani H, Pham P, Haguet V and Reyne G
Magnetophoretic and dielectrophoretic actuations coupled with diamagnetic trapping in air and liquids.
Sensor Letters, 2009, 7(3): 470-474

Mugherli L, Burchak O N, Balakireva L A, Thomas A, Chatelain F and Balakirev M Y
In situ assembly and screening of enzyme inhibitors with surface-tension microarrays.
Angewandte Chemie International Edition England, 2009, 48(41): 7639-7644

Murn J, Mlinaric-Rascan I, Maltère P, Frouin V, Vaigot P and Gidrol X
Myc is a critical hub in the BCR-regulated transcriptional network controlling proliferation and apoptosis of mouse B cells.
BMC Genomics, 2009, 10: 323-336

Picollet-D'hahan N, Fonteille I, Marcel-Kermarrec F, Weiss N, Arnoult C, de Waard M and Gidrol X
Toxint'patch: An automated and portable cell-on-chip device for toxin detection in food and environment.
Advances in Microarray Technology, 2009, Stockholm

Pozzi S, Merico D, Zambelli F, Pavesi G, Robert A, Maltere P, Gidrol X, Mantovani R and Vigano MA
Transcriptional network of p63 in human keratinocytes.
Plos One, 2009, 4: e5008

Rollin J, Bréchet C, Régina S, Tenenhaus A, Guyétant S and Gidrol X
The intracellular location of ID2 expression has a predictive value in non-small-cell lung cancer.
Plos One, 2009, 4: e4158

Thevenon D, Engel E, Avet-Rochex A, Gottar M, Bergeret E, Tricoire H, Benaud C, Baudier J, Taillebourg E and Fauvarque MO
The Drosophila ubiquitin-specific protease dUSP36/Scny targets IMD to prevent constitutive immune signaling.
Cell Host and Microbe, 2009, 6(4): 309-320



2008 

Auliac C, Frouin V, Gidrol X and d'Alché-Buc F
Evolutionary approaches for gene regulatory network inference.
BMC Bioinformatic, 2008, 9: 91

Balakirev MY and Wilkinson KD
OTU takes the chains OUT.
Nature Chemical Biology, 2008, 4(4): 227-228

Brianon-Marjollet A, Balenci L, Farion R, Fernandez M, Barbier E, Esteve F, Remy C and Baudier J
Implication of oligodendrocyte progenitor cells in central nervous system tumors.
Bulletin du Cancer, 2008, 95: S61-S61

Gidrol X, Wu N, Frouin V and Debily MA
Inférence des réseaux de régulation transcriptionnelle.
Médecine/sciences, 2008, 24: 629-634

Gruel G, Voisin P, Vaurijux A, Roch-Lefevre S, Grégoire E, Maltere P, Petat C, Gidrol X, Voisin P and Roy L
Broad modulation of gene expression in CD4-Lymphocyte subpopulmations in response to low doses of ionizing radiation.
Radiation Research, 2008, 170: 335-344

Hubstenberger A, Labourdette G, Baudier J and Rousseau D
ATAD 3A and ATAD 3B are distal 1p-located genes differentially expressed in human glioma cell lines and present in vitro anti-oncogenic and chemoresistant properties.
Experimental Cell Research, 2008, 314(15): 2870-2883

Kwon M, Godinho S, Chandhok NS, Ganem NJ, Azioune A, Thery M and Pellman D
Mechanisms to suppress multipolar divisions in cancer cells with extra centrosomes.
Genes and Development, 2008, 22(16): 2189-2203

Murn J, Alibert O, Wu N, Tendil S and Gidrol X
Prostaglandin E2 regulates B-cell proliferation through a candidate tumor suppressor, Ptger4.
Journal of Expimental Medicine, 2008, 205: 3091-103

Thery M and Bornens M
Get round and stiff for mitosis.
Hfsp Journal, 2008, 2(2): 65-71



2007 

Balenci L, Saoudi Y, Grunwald D, Deloulme JC, Bouron A, Bernards A and Baudier J
IQGAP1 regulates adult neural progenitors in vivo and vascular endothelial growth factor-triggered neural progenitor migration in vitro.
Journal of Neuroscience, 2007, 27(17): 4716-4724

Castel D, Debily MA, Pitaval A and Gidrol X
Cell microarrays for functional exploration of genomes.
Methods in Molecular Biology, 2007, 381: 375-384

Chetouani H, Jeandey C, Haguet V, Rostaing H, Dieppedale C, Jacquot J-F, Kerlin T and Reyne G
Principle and analysis of a two-dimensional on-chip magnetophoresis of bioparticles for contamination-free biochemical reactors.
IEEE Transactions on Magnetics, 2007, 43(4): 1673-1676

Cuvelier D, Thery  M, Chu YS, Dufour S, Thiéry JP, Bornens M, Nassoy P and Mahadevan L
The universal dynamics of cell spreading.
Current Biology, 2007, 17: 1-6

Fink J, Thery M, Azioune A, Dupont R, Chatelain F, Bornens M and Piel M
Comparative study and improvement of current cell micro-patterning techniques.
Lab On Chip, 2007, 7(6): 672-680

Fouqué B, Brachet AG, Gétin S, Pégon P, Obeïd P, Delapierre G and Chatelain F
Improvement of yeast biochip sensitivity using multilayer inorganic sol-gel substrates.
Biosensors & Bioelectronics, 2007, 22: 2151-2157

Huang Y, Laval SH, van Remoortere A, Baudier J, Benaud C, Anderson LV, Straub V, Deelder A, Frants RR, den Dunnen JT, Bushby K and van der Maarel SM
AHNAK, a novel component of the dysferlin protein complex, redistributes to the cytoplasm with dysferlin during skeletal muscle regeneration.
FASEB J, 2007, 21(3): 732-742

Lemaire F, Mandon CA, Reboud J, Papine A, Angulo J, Pointu H, Diaz-Latoud C, Lajaunie C, Chatelain F, Arrigo AP and Schaack B
Toxicity assays in nanodrops combining bioassay and morphometric endpoints.
PLoS ONE, 2007, 2: e163

Marie-Claire C, Courtin C, Robert A, Gidrol X and Roques B
Sensitization to the conditioned rewarding effects of morphine modulates gene expression in rat hippocampus.
Neuropharmacology, 2007, 52: 430-435

Pages D, Sanchez L, Conrod S, Gidrol X, Heulin T and Achouack W
Exploration of intraclonal strategies facing cadmium toxicity of Pseudomonas brassicacearum.
Environmental Microbiology, 2007, 9: 2820-2835

Raponi E, Agenes F, Delphin C, Assard N, Baudier J, Legraverend C and Deloulme JC
S100B expression defines a state in which GFAP-expressing cells lose their neural stem cell potential and acquire a more mature developmental stage.
Glia, 2007, 55(2): 165-177

Robine N, Uematsu N, Amiot F, Gidrol X, Barillot E, Nicolas A and Borde V
Genome-wide redistribution of meiotic double-strand breaks in S. cerevisiae.
Molecular and Cellular Biology, 2007, 27: 1868-1880

Simon A, Girard-Egrot A, Sauter F, Pudda C, Picollet D'Hahan N, Blum L, Chatelain F and Fuchs A
Formation and stability of a suspended biomimetic lipid bilayer on silicon submicrometer-sized pores.
Journal of Colloid Interface Science, 2007, 308(2):337-343


Sordel T, Kermarec-Marcel F, Garnier-Raveaud S, Glade N, Sauter F, Pudda C, Borella M, Chatelain F, Bruckert F and Picollet-D’hahan N
Influence of glass and polymer coatings on CHO cell morphology and adhesion.
Biomaterials, 2007, 28(8): 1572-1584

Tabony J
Self-organization and other emergent properties in a simple biological system of microtubules.
Complexus, 2007, 3(4): 200-210

Tabony J
Self-organisation and higher level emergent phenomena in a population of microtubules.
NeuroQuantology, 2007, 5(1): 100-144

Tabony J, Rigotti N, Glade N and Cortès S
Effect of weightlessness on colloidal particle transport and segregation in self-organising microtubule preparations.
Biochysical Chemistry, 2007, 127(3): 172-180

Thery M and Bornens M
L’adhérence guide la polarité cellulaire.
Medecine Sciences (Paris), 2007, 23(3): 230-232

Thery M, Jimenez-Dalmaroni A, Racine V, Bornens M and Julicher F
Experimental and theoretical study of mitotic spindle orientation.
Nature, 2007,447(7143): 493-496



2006

Balenci L, Clarke ID, Dirks PB, Assard N, Ducray F, Jouvet A, Belin MF, Honnorat J and Baudier J
IQGAP1 protein specifies amplifying cancer cells in glioblastoma multiforme.
Cancer Research, 2006, 66(18): 9074-9082

Barrey E, Mucher E, Robert C, Amiot F and Gidrol X
Gene expression profiling in blood cells of endurance horses completing competition or disqualified due to metabolic disorder.
Equine Veterinary Journal Supplement, 2006, 36: 43-49

Burchak ON, Jaquinod M, Cottin C, Mugherli L, Iwai K, Chatelain F and Balakirev MY
Chemoenzymatic ubiquitination of artificial substrates.
Chembiochem, 7(11): 1667-1669

Burchak ON, Mugherli L, Chatelain F and Balakirev MY
Fluorescein-based amino acids for solid phase synthesis of fluorogenic protease substrates.
Bioorganic and Medicinal Chemistry, 14(8): 2559-2558

Castel D, Pitaval A, Debily MA and Gidrol X
Cell microarrays in drug discovery.
Drug Discovery Today, 2006, 11(13-14): 616-622

Chetouani H, Jeandey C, Haguet V, Rostaing H, Dieppedale C and Reyne G
Diamagnetic levitation with permanent magnets for contactless guiding and trapping of microdroplets and particles in air and liquids.
IEEE Transactions on Magnetics, IEEE International Magnetics Conference, 2006, 42(10): 3557-3559

Coecke S, Ahr H, Blaauboer BJ, Bremer S, Casati S, Castell J, Combes R, Corvi R, Crespi CL, Cunningham ML, Elaut G, Eletti B, Freidig A, Gennari A, Ghersi-Egea JF, Guillouzo A, Hartung T, Hoet P, Ingelman-Sundberg M, Munn S, Janssens W, Ladstetter B, Leahy D, Long A, Meneguz A, Monshouwer M, Morath S, Nagelkerke F, Pelkonen O, Ponti J, Prieto P, Richert L, Sabbioni E, Schaack B, Steiling W, Testai E, Vericat JA and Worth A
Metabolism: A bottleneck in in vitro toxicological test development. The report and recommendations of ECVAM workshop 54.
ATLA Alternatives to Laboratory Animals, 34(1): 49-84

Cortès S, Glade N, Chartier I and Tabony J
Microtubule self-organisation by reaction-diffusion processes in miniature cell-sized containers and phospholipid vesicles.
Biophysical Chemistry, 2006, 120(3): 168-177

Denoual M, Macé Y, Le Pioufle B, Mognol P, Castel D and Gidrol X
Vacuum casting to manufacture a plastic biochip for highly parallel cell transfection.
Meas. Sci. Technol, 2006, 17: 3134-40

De Seranno S, Benaud C, Assard N, Khediri S, Gerke V, Baudier J and Delphin C
Identification of an AHNAK binding motif specific for the Annexin2/S100A10 tetramer.
Journal of Biological Chemistry, 2006, 281(46): 35030-35038

Dubacq C, Chevalier A, Courbeyrette R, Petat C, Gidrol X and Mann C
Role of the iron mobilization and oxidative stress regulons in the genomic response of yeast to hydroxyurea.
Molecular Genetics and Genomics, 2006, 275: 114-124

Fuchs A, Romani A, Freida D, Medoro G, Abonnenc M, Altomare L, Chartier I, Guergour D, Villiers C, Marche PN, Tartagni M, Guerrieri R, Chatelain F and Manaresi N
Electronic sorting and recovery of single live cells from microlitre sized samples.
Lab on a Chip, 6(1): 121-126


Glade N, Beaugnon E and Tabony J
Ground-based methods reproduce space-flight experiments and show that weak vibrations trigger microtubule self-organisation.
Biophysical Chemistry, 2006, 121(1): 1-6

Gruel G, Lucchesi C, Pawlik A, Frouin V, Alibert O, Kortuewski T, Zarour A, Jacquelin B, Gidrol X and Tronik- Le Roux D
Novel microarray-based method for estimating exposure to ionizing radiation.
Radiation Research, 2006, 166: 746-756

Larderet G, Fortunel NO, Vaigot P, Cegalerba M, Maltere P, Zobiri O, Gidrol X, Waksman G and Martin MT
Human side population keratinocytes exhibit long-term proliferative potential and a specific gene expression profile and can form a pluristratified epidermis.
Stem Cells, 2006, 24: 965-974

Le Brigand K, Russell R, Moreilhon C, Rouillard JM, Jost B, Amiot F, Magnone V, Bole-Feysot C, Rostagno P, Virolle V, Defamie V, Dessen P, Williams G, Lyons P, Rios G, Mari B, Gulari E, Kastner P, Gidrol X, Freeman TC and Barbry P
An open-access long oligonucleotide microarray resource for analysis of the human and mouse transcriptomes.
Nucleic Acids Research, 2006, 34: e87

Mucher E, JayR L, Rossignol F, Amiot F, Gidrol X and Barrey E
Gene expression profiling in equine muscle tissues using mouse cDNA microarrays.
Equine Veterinary Journal Supplement, 2006, 36: 359-64

Mugherli L, Burchak ON, Chatelain F and Balakirev MY
Fluorogenic ester substrates to assess proteolytic activity.
Bioorganic and Medicinal Chemistry Letters, 2006, 16(17): 4488-4491

Rochon C, Frouin V, Bortoli S, Giraud-Triboult K, Duverger V, Vaigot P, Petat C, Fouchet P, Lassalle B, Alibert O, Gidrol X and Piétu G
Comparison of gene expression pattern in SP cell populations from four tissues to define common "stemness functions".
Experimental Cell Research, 2006, 312(11): 2074-2082

Sordel T, Garnier-Raveaud S, Sauter F, Pudda C, Marcel F, De Waard M, Arnoult C, Vivaudou M, Chatelain F and Picollet d'Hahan N
Hourglass SiO2 coating increases the performance of planar patch-clamping.
Journal of Biotechnology, 125(1): 142-154


Su XY, Della-Valle V, Andre-Schmutz I, Lemercier C, Radford-Weiss I, Ballerini P, Lessard M, Lafage-Pochitaloff M, Mugneret F, Berger R, Romana SP, Bernard OA and Penard-Lacronique V
HOX11L2/TLX3 is transcriptionally activated through T-cell regulatory elements downstream of BCL11B as a result of the t(5;14)(q35;q32).
Blood, 2006, 108(13): 4198-4201

Tabony J
Historical and conceptual background of self-organization by reactive processes.
Biology of the Cell, 2006, 98(10): 589-602

Tabony J
Microtubules viewed as molecular ant colonies.
Biology of the Cell, 2006, 98(10): 603-617

Tabony J
Self-organisation and other emergent properties in a simple biological system of microtubules.
Complexus, 2006, 3: 200-210

Tabony J
Auto-organisation biologique par processus réactif in Morphogenèse, Edited by Lesne A and Bourgone P Belin, collection Echelles, 2006, pp 98-117

Théry M and Bornens M
Cell shape and cell division.
Current Opinion in Cell Biology, 2006, 18(6): 648-657

Vigano MA Lamartine J, Testoni B, Merico D, Alotto D, Castagnoli C, Robert A, Candi E, Melino G, Gidrol X & Mantovani R
New p63 targets in keratinocytes identified by a genome-wide approach.
EMBO Journal, 2006, 25: 5105-16



2005 

Baghdoyan S, Lamartine J, Castel D, Pitaval A, Roupioz Y, Franco N, Duarte M, Martin MT, Gidrol X
Id2 reverts cell cycle arrest induced by gamma irradiation in human HaCat keratinocytes.
Journal of Biological Chemistry, 2005, 280: 15836-15841

Balakirev MY, Porte S, Vernaz-Gris M, Berger M, Arié JP, Fouqué B and Chatelain F
Photochemical patterning of biological molecules inside glass capillary.
Analytical Chemistry, 2005, 77(17): 5474-5479

Decraene C, Benchaouir R, Dillies MA, Israeli D, Bortoli S, Rochon C, Rameau P, Pitaval A, Tronik-Le Roux D, Danos O, Gidrol X, Garcia L and Pietu G
Global transcriptional characterization of SP and MP cells from the myogenic C2C12 cell line: Effect of FGF6.
Physiological Genomics, 2005, 3: 132-149

Fouqué B, Schaack B, Obeïd P, Combe S, Gétin S, Barritault P, Chaton P and Chatelain F
Multiple wavelength fluorescence enhancement on glass substrates for biochip and cell analyses.
Biosensors and Bioelectronics, 2005, 20(11): 2335-2340

Franco N, Lamartine J, Frouin V, Le minter P, Petat C, Leplat JJ, Libert F, Gidrol X and Martin MM
Low-dose exposure to gamma rays induces specific gene regulations in normal human keratinocytes.
Radiations Research, 2005, 163: 623-35

Gaugiran S, Gétin S, Fedeli JM, Colas G, Fuchs A, Chatelain F and Dérouard J
Optical manipulation of microparticles and cells on silicon nitride waveguides.
Optics Express,
2005, 13(18): 6956

Gentil BJ, Benaud C, Delphin C, Remy C, Berezowski V, Cecchelli R, Feraud O, Vittet D and Baudier J
Specific AHNAK expression in brain endothelial cells with barrier properties.
Journal of Cellular Physiology, 2005, 203(2): 362-371

Glade N and Tabony J
Brief exposure to high magnetic fields determines microtubule self-organisation by reaction-diffusion processes.
Biophysical Chemistry, 2005, 115(1): 29-35

Jacquelin B, Kortulewski T, Vaigot P, Pawlik A, Gruel G, Alibert O, Soularue P, Joubert C, Gidrol X and Tronik-Le Roux D
A novel pathway for megakaryocyte production following in vivo conditional eradication of integrin αIIb expressing cells.
Blood, 2005, 106: 1965-1974

Lamartine J, Franco N, Le Minter P, Soularue P, Alibert O, Leplat JJ, Gidrol X, Waksman G and Martin M
Activation of an energy providing response in human keratinocytes after γ irradiation.
Journal of Cellular Biochemistry, 2005, 95: 620-631

Lemaître G, Gonnet F, Gidrol X, Martin MT, Tortajada J and Waksman G
CD98, a novel marker of transient amplifying human keratinocytes.
Proteomics, 2005, 14: 3637-3645

Octobre G, Lemercier C, Khochbin S, Robert-Nicoud M and Souchier C
Monitoring the interaction between DNA and transcription factor (MEF2a) using fluorescence correlation spectroscopy.
Comptes Rendus Biologies, 2005, 328: 1033-1040

Roupioz Y, Castel D, Pitaval A, Baghdoyan S and Gidrol X
Puces à cellules et génomique fonctionnelle.
Médecine/sciences, 2005, 21: 535-38

Schaack B, Reboud J, Combe S, Fouqué B, Berger F, Boccard S, Filhol-Cochet O and Chatelain F
A ‘drop-chip’ cell array for high throughput DNA and siRNA transfection combined with drug screening.
NanoBiotechnology, 2005, 1: 166-194

Tcherniuk SO, Chroboczek J and Balakirev MY
Construction of tumor-specific toxins using ubiquitin fusion technique.
Molecular Therapy, 2005, 11(2): 196-204



2004 

Haguet V, Martin D, Marcon L, Heim T, Stiévenard D, Olivier C, El-Mahdi O and Melnyk O
Combined nanogap nanoparticles nanosensor for electrical detection of biomolecular interactions between polypeptides.
Applied Physics Letters, 2004, 84(7): 1213-1215

Nanao MH, Tcherniuk SO, Chroboczek J, Dideberg O, Dessen A and Balakirev MY
Crystal structure of human otubain 2.
EMBO Reports, 2004, 5: 783-788

Picollet-D’hahan N, Sordel Y, Garnier-Ravéaud S, Sauter F, Pudda C, Ricoul F, Marcel F and Chatelain F
A silicon-based multi-patch device for ion channel current sensing.
Sensor Letters, 2004, Vol. 2, n°2




2003 

Balakirev MY, Tcherniuk SO, Jaquinod M and Chroboczek J
Otubains: A new family of cysteine proteases in the ubiquitin pathway.
EMBO Reports, 2003, 4: 517-522

Barritault P, Gétin P, Chaton P, André B, Vinet F and Fouqué B
Optical thin film serving biotechnology: Fluorescence enhancement of DNA chips.
Proceedings of the SPIE, 2003, 5250: 12-20




2002 

Balakirev MY, Jaquinod M, Haas A and Chroboczek J
Deubiquitinating function of adenovirus proteinase.
Journal of Virology, 2002, 76, 6323-6331, Couverture de J. Virol. 76(15)

Barritault P, Getin S, Chaton P, Vinet F and Fouqué B
Polarized gonion fluorimetric measurements of DNA chip: A step forward towards fluorescence quantification.
Proceedings of the SPIES: Biomedical nanotechnology architectures and applications, 2002, 4626: 9-16

Barritault P, Gétin S, Chaton P, Vinet F, Fouqué B and Magnéa N
Determination of surface bound fluorophore orientation by goniometric fluorescence polarization: Application to DNA chip.
Applied Optics, 2002, 41(22): 4732-4738

de Longueville F, Meneses-Lorente G, Surry D, Bertholet V, Le Bourdellès B and Remacle J
Gene expression profiling of drug metabolism and toxicology markers using a low-density DNA microarray.
Biochemical Pharmacology, 2002, 64(1): 137-149

Fuchs A, Jeanson H, Claustre P, Gruss JA, Revol-Cavalier F, Caillat P, Mastromatteo U, Scurati M, Villa F, Barlocchi G, Corona P and Grieco B
A silicon Lab-On-Chip for integrated sample preparation by PCR and DNA analysis by hybridization.
IEEE Proceedings MicroTechnologies in Medecine and Biology, 2002, 227-231

Himoudi N, Abraham JD, Fournillier A, Lone YC, Joubert A, Op De Beeck A, Freida D, Lemonnier F, Kieny MP and Inchauspe G
Comparative vaccine studies in HLA-A2.1-transgenic mice reveal a clustered organization of epitopes presented in hepatitis C virus natural infection.
Journal of Virolology, 2002, 76: 12735-12746

Sun GC, Samic H, Haguet V, Pesant JC, Montagne JP, Lenoir M and Bourgoin JC
Performances of epitaxial GaAs p/i/n structures for X-ray imaging.
Nuclear Instruments and Methods in Physics Research A, 2002, 487(1-2): 102-106